Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scamp3O35609 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scamp3O35609 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scamp3O35609 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.75■□□□□ 0.91
Scamp3O35609 Gm40881-201ENSMUST00000223397 166 ntBASIC20.75■□□□□ 0.91
Scamp3O35609 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scamp3O35609 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scamp3O35609 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scamp3O35609 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scamp3O35609 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Scamp3O35609 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Scamp3O35609 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scamp3O35609 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.74■□□□□ 0.91
Scamp3O35609 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.74■□□□□ 0.91
Scamp3O35609 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Scamp3O35609 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scamp3O35609 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Scamp3O35609 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scamp3O35609 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp3O35609 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp3O35609 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp3O35609 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.73■□□□□ 0.91
Scamp3O35609 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Scamp3O35609 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp3O35609 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp3O35609 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scamp3O35609 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scamp3O35609 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.72■□□□□ 0.91
Scamp3O35609 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Scamp3O35609 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scamp3O35609 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.71■□□□□ 0.91
Scamp3O35609 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scamp3O35609 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Scamp3O35609 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scamp3O35609 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scamp3O35609 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scamp3O35609 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.7■□□□□ 0.9
Scamp3O35609 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.7■□□□□ 0.9
Scamp3O35609 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scamp3O35609 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scamp3O35609 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scamp3O35609 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.69■□□□□ 0.9
Scamp3O35609 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.69■□□□□ 0.9
Scamp3O35609 Gm10399-202ENSMUST00000202768 748 ntBASIC20.69■□□□□ 0.9
Scamp3O35609 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scamp3O35609 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scamp3O35609 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scamp3O35609 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scamp3O35609 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scamp3O35609 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Scamp3O35609 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scamp3O35609 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Scamp3O35609 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Scamp3O35609 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scamp3O35609 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scamp3O35609 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.68■□□□□ 0.9
Scamp3O35609 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scamp3O35609 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scamp3O35609 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scamp3O35609 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.67■□□□□ 0.9
Scamp3O35609 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scamp3O35609 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Scamp3O35609 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scamp3O35609 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scamp3O35609 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
Scamp3O35609 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Scamp3O35609 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.66■□□□□ 0.9
Scamp3O35609 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scamp3O35609 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scamp3O35609 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scamp3O35609 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.65■□□□□ 0.9
Scamp3O35609 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scamp3O35609 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scamp3O35609 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scamp3O35609 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scamp3O35609 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Scamp3O35609 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms