Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slc1a6O35544 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a6O35544 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a6O35544 Scarna2-201ENSMUST00000157560 414 ntBASIC20.6■□□□□ 0.89
Slc1a6O35544 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.6■□□□□ 0.89
Slc1a6O35544 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a6O35544 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc1a6O35544 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slc1a6O35544 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Gm16437-201ENSMUST00000025669 507 ntBASIC20.59■□□□□ 0.89
Slc1a6O35544 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc1a6O35544 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Slc1a6O35544 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc1a6O35544 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc1a6O35544 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slc1a6O35544 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Slc1a6O35544 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc1a6O35544 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.58■□□□□ 0.88
Slc1a6O35544 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a6O35544 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a6O35544 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a6O35544 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc1a6O35544 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
Slc1a6O35544 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc1a6O35544 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Slc1a6O35544 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc1a6O35544 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc1a6O35544 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slc1a6O35544 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Slc1a6O35544 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc1a6O35544 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Slc1a6O35544 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc1a6O35544 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc1a6O35544 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a6O35544 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.54■□□□□ 0.88
Slc1a6O35544 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a6O35544 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc1a6O35544 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.53■□□□□ 0.88
Slc1a6O35544 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Slc1a6O35544 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slc1a6O35544 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc1a6O35544 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Slc1a6O35544 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slc1a6O35544 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
Slc1a6O35544 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc1a6O35544 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc1a6O35544 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slc1a6O35544 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a6O35544 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc1a6O35544 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc1a6O35544 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms