Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capn1O35350 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.23■□□□□ 0.67
Capn1O35350 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Capn1O35350 Gm22238-201ENSMUST00000175222 88 ntBASIC19.23■□□□□ 0.67
Capn1O35350 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.23■□□□□ 0.67
Capn1O35350 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.23■□□□□ 0.67
Capn1O35350 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Capn1O35350 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.22■□□□□ 0.67
Capn1O35350 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Capn1O35350 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Capn1O35350 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Capn1O35350 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.21■□□□□ 0.67
Capn1O35350 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.21■□□□□ 0.67
Capn1O35350 Gm10399-202ENSMUST00000202768 748 ntBASIC19.21■□□□□ 0.67
Capn1O35350 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Capn1O35350 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Capn1O35350 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.2■□□□□ 0.66
Capn1O35350 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capn1O35350 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capn1O35350 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capn1O35350 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Capn1O35350 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.2■□□□□ 0.66
Capn1O35350 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capn1O35350 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capn1O35350 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Capn1O35350 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Capn1O35350 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Capn1O35350 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Capn1O35350 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.19■□□□□ 0.66
Capn1O35350 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Capn1O35350 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Capn1O35350 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capn1O35350 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Capn1O35350 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capn1O35350 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Capn1O35350 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Capn1O35350 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capn1O35350 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Capn1O35350 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Capn1O35350 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Capn1O35350 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Capn1O35350 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.16■□□□□ 0.66
Capn1O35350 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Capn1O35350 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.16■□□□□ 0.66
Capn1O35350 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.15■□□□□ 0.66
Capn1O35350 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.15■□□□□ 0.66
Capn1O35350 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Capn1O35350 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 Gm13241-201ENSMUST00000094493 780 ntBASIC19.15■□□□□ 0.66
Capn1O35350 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.15■□□□□ 0.66
Capn1O35350 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Capn1O35350 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Capn1O35350 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capn1O35350 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capn1O35350 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capn1O35350 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capn1O35350 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Capn1O35350 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.14■□□□□ 0.65
Capn1O35350 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.13■□□□□ 0.65
Capn1O35350 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms