Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ndufb11O09111 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.79■□□□□ 0.28
Ndufb11O09111 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ndufb11O09111 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ndufb11O09111 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.78■□□□□ 0.28
Ndufb11O09111 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufb11O09111 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufb11O09111 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufb11O09111 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ndufb11O09111 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufb11O09111 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufb11O09111 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ndufb11O09111 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ndufb11O09111 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.78■□□□□ 0.28
Ndufb11O09111 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufb11O09111 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufb11O09111 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ndufb11O09111 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.77■□□□□ 0.27
Ndufb11O09111 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufb11O09111 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufb11O09111 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ndufb11O09111 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ndufb11O09111 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ndufb11O09111 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ndufb11O09111 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufb11O09111 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufb11O09111 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufb11O09111 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufb11O09111 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufb11O09111 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ndufb11O09111 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Ndufb11O09111 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ndufb11O09111 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufb11O09111 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufb11O09111 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ndufb11O09111 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufb11O09111 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufb11O09111 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.74■□□□□ 0.27
Ndufb11O09111 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.74■□□□□ 0.27
Ndufb11O09111 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufb11O09111 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.74■□□□□ 0.27
Ndufb11O09111 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Ndufb11O09111 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ndufb11O09111 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ndufb11O09111 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ndufb11O09111 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ndufb11O09111 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ndufb11O09111 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ndufb11O09111 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ndufb11O09111 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufb11O09111 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufb11O09111 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ndufb11O09111 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufb11O09111 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Ndufb11O09111 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufb11O09111 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ndufb11O09111 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufb11O09111 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ndufb11O09111 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufb11O09111 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufb11O09111 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufb11O09111 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.71■□□□□ 0.27
Ndufb11O09111 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ndufb11O09111 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ndufb11O09111 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Ndufb11O09111 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufb11O09111 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufb11O09111 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ndufb11O09111 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufb11O09111 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ndufb11O09111 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufb11O09111 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufb11O09111 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Ndufb11O09111 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ndufb11O09111 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ndufb11O09111 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ndufb11O09111 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms