Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trav13d-3J3QMG8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13d-3J3QMG8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13d-3J3QMG8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13d-3J3QMG8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.42■□□□□ 0.54
Trav13d-3J3QMG8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13d-3J3QMG8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13d-3J3QMG8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13d-3J3QMG8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13d-3J3QMG8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trav13d-3J3QMG8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-3J3QMG8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav13d-3J3QMG8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-3J3QMG8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-3J3QMG8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav13d-3J3QMG8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13d-3J3QMG8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trav13d-3J3QMG8 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.39■□□□□ 0.53
Trav13d-3J3QMG8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13d-3J3QMG8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13d-3J3QMG8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13d-3J3QMG8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav13d-3J3QMG8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trav13d-3J3QMG8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13d-3J3QMG8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13d-3J3QMG8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav13d-3J3QMG8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav13d-3J3QMG8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Trav13d-3J3QMG8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13d-3J3QMG8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13d-3J3QMG8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Gm10232-201ENSMUST00000089221 720 ntBASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13d-3J3QMG8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13d-3J3QMG8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.33■□□□□ 0.53
Trav13d-3J3QMG8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav13d-3J3QMG8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav13d-3J3QMG8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav13d-3J3QMG8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13d-3J3QMG8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.32■□□□□ 0.52
Trav13d-3J3QMG8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav13d-3J3QMG8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13d-3J3QMG8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms