Protein–RNA interactions for Protein: G5E870

Trip12, E3 ubiquitin-protein ligase TRIP12, mousemouse

Known RBP Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trip12G5E870 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trip12G5E870 Gm43137-201ENSMUST00000198052 594 ntBASIC19.34■□□□□ 0.69
Trip12G5E870 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.34■□□□□ 0.69
Trip12G5E870 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trip12G5E870 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trip12G5E870 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trip12G5E870 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.33■□□□□ 0.68
Trip12G5E870 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trip12G5E870 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trip12G5E870 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trip12G5E870 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trip12G5E870 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Trip12G5E870 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.32■□□□□ 0.68
Trip12G5E870 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trip12G5E870 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trip12G5E870 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.32■□□□□ 0.68
Trip12G5E870 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trip12G5E870 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trip12G5E870 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trip12G5E870 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Trip12G5E870 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.31■□□□□ 0.68
Trip12G5E870 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.31■□□□□ 0.68
Trip12G5E870 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trip12G5E870 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trip12G5E870 Gm8495-201ENSMUST00000188740 694 ntBASIC19.3■□□□□ 0.68
Trip12G5E870 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trip12G5E870 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trip12G5E870 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trip12G5E870 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trip12G5E870 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.3■□□□□ 0.68
Trip12G5E870 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Trip12G5E870 Gm43017-201ENSMUST00000198296 752 ntBASIC19.3■□□□□ 0.68
Trip12G5E870 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trip12G5E870 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trip12G5E870 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trip12G5E870 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Trip12G5E870 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trip12G5E870 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.28■□□□□ 0.68
Trip12G5E870 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trip12G5E870 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
Trip12G5E870 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trip12G5E870 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.27■□□□□ 0.68
Trip12G5E870 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.27■□□□□ 0.67
Trip12G5E870 Gm26571-201ENSMUST00000181399 666 ntBASIC19.27■□□□□ 0.67
Trip12G5E870 Gm29257-201ENSMUST00000186115 639 ntBASIC19.27■□□□□ 0.67
Trip12G5E870 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trip12G5E870 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.26■□□□□ 0.67
Trip12G5E870 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trip12G5E870 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trip12G5E870 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trip12G5E870 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Trip12G5E870 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trip12G5E870 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trip12G5E870 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trip12G5E870 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
Trip12G5E870 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.24■□□□□ 0.67
Trip12G5E870 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trip12G5E870 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trip12G5E870 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trip12G5E870 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.24■□□□□ 0.67
Trip12G5E870 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trip12G5E870 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trip12G5E870 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trip12G5E870 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trip12G5E870 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Trip12G5E870 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trip12G5E870 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trip12G5E870 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trip12G5E870 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trip12G5E870 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trip12G5E870 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms