Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.27■□□□□ 0.68
TprF6ZDS4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TprF6ZDS4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TprF6ZDS4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TprF6ZDS4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.27■□□□□ 0.68
TprF6ZDS4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
TprF6ZDS4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TprF6ZDS4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TprF6ZDS4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TprF6ZDS4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.26■□□□□ 0.67
TprF6ZDS4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 Gm37179-201ENSMUST00000194862 823 ntBASIC19.26■□□□□ 0.67
TprF6ZDS4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.26■□□□□ 0.67
TprF6ZDS4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.26■□□□□ 0.67
TprF6ZDS4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.26■□□□□ 0.67
TprF6ZDS4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TprF6ZDS4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TprF6ZDS4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TprF6ZDS4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TprF6ZDS4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TprF6ZDS4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TprF6ZDS4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.25■□□□□ 0.67
TprF6ZDS4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TprF6ZDS4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.25■□□□□ 0.67
TprF6ZDS4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.25■□□□□ 0.67
TprF6ZDS4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TprF6ZDS4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TprF6ZDS4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.24■□□□□ 0.67
TprF6ZDS4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TprF6ZDS4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TprF6ZDS4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TprF6ZDS4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TprF6ZDS4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TprF6ZDS4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TprF6ZDS4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TprF6ZDS4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TprF6ZDS4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TprF6ZDS4 Gm43137-201ENSMUST00000198052 594 ntBASIC19.21■□□□□ 0.67
TprF6ZDS4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TprF6ZDS4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TprF6ZDS4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TprF6ZDS4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TprF6ZDS4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Mir7075-201ENSMUST00000184187 82 ntBASIC19.2■□□□□ 0.66
TprF6ZDS4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TprF6ZDS4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.2■□□□□ 0.66
TprF6ZDS4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TprF6ZDS4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TprF6ZDS4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
TprF6ZDS4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TprF6ZDS4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
TprF6ZDS4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TprF6ZDS4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
TprF6ZDS4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.19■□□□□ 0.66
TprF6ZDS4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TprF6ZDS4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TprF6ZDS4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.18■□□□□ 0.66
TprF6ZDS4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.18■□□□□ 0.66
TprF6ZDS4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.18■□□□□ 0.66
TprF6ZDS4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.18■□□□□ 0.66
TprF6ZDS4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TprF6ZDS4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TprF6ZDS4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.18■□□□□ 0.66
TprF6ZDS4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TprF6ZDS4 Gm42569-201ENSMUST00000200539 472 ntBASIC19.17■□□□□ 0.66
TprF6ZDS4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TprF6ZDS4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TprF6ZDS4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.17■□□□□ 0.66
TprF6ZDS4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TprF6ZDS4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms