Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc149F6V035 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc149F6V035 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Ccdc149F6V035 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Ccdc149F6V035 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc149F6V035 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc149F6V035 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccdc149F6V035 Gm9870-201ENSMUST00000063874 645 ntBASIC21.28■■□□□ 1
Ccdc149F6V035 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccdc149F6V035 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.27■■□□□ 1
Ccdc149F6V035 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc149F6V035 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc149F6V035 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Ccdc149F6V035 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc149F6V035 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc149F6V035 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.27■□□□□ 0.99
Ccdc149F6V035 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc149F6V035 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc149F6V035 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc149F6V035 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc149F6V035 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccdc149F6V035 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc149F6V035 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc149F6V035 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.23■□□□□ 0.99
Ccdc149F6V035 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc149F6V035 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Ccdc149F6V035 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc149F6V035 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Gm27454-201ENSMUST00000185090 204 ntBASIC21.22■□□□□ 0.99
Ccdc149F6V035 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc149F6V035 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ccdc149F6V035 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc149F6V035 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc149F6V035 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc149F6V035 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc149F6V035 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc149F6V035 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc149F6V035 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.2■□□□□ 0.98
Ccdc149F6V035 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc149F6V035 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc149F6V035 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
Ccdc149F6V035 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.18■□□□□ 0.98
Ccdc149F6V035 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc149F6V035 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc149F6V035 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.16■□□□□ 0.98
Ccdc149F6V035 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc149F6V035 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ccdc149F6V035 Gm45417-201ENSMUST00000209533 758 ntBASIC21.15■□□□□ 0.98
Ccdc149F6V035 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc149F6V035 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms