Protein–RNA interactions for Protein: F2Z478

Gm11238, Predicted gene 11238, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11238F2Z478 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11238F2Z478 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11238F2Z478 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11238F2Z478 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.08■■□□□ 1.13
Gm11238F2Z478 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11238F2Z478 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm11238F2Z478 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.08■■□□□ 1.13
Gm11238F2Z478 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Gm11238F2Z478 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Gm11238F2Z478 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Gm11238F2Z478 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.08■■□□□ 1.12
Gm11238F2Z478 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm11238F2Z478 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm11238F2Z478 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm11238F2Z478 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11238F2Z478 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Gm7143-201ENSMUST00000222811 859 ntBASIC22.06■■□□□ 1.12
Gm11238F2Z478 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm11238F2Z478 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Gm11238F2Z478 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
Gm11238F2Z478 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.05■■□□□ 1.12
Gm11238F2Z478 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Gm11238F2Z478 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm11238F2Z478 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Gm11238F2Z478 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm11238F2Z478 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11238F2Z478 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11238F2Z478 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.04■■□□□ 1.12
Gm11238F2Z478 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11238F2Z478 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Gm11238F2Z478 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Gm11238F2Z478 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11238F2Z478 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11238F2Z478 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC22.02■■□□□ 1.12
Gm11238F2Z478 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11238F2Z478 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm11238F2Z478 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm11238F2Z478 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC22■■□□□ 1.11
Gm11238F2Z478 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm11238F2Z478 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm11238F2Z478 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm11238F2Z478 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm11238F2Z478 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Gm11238F2Z478 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm11238F2Z478 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Gm11238F2Z478 Gm6139-201ENSMUST00000079261 882 ntBASIC21.97■■□□□ 1.11
Gm11238F2Z478 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Gm11238F2Z478 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm11238F2Z478 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm11238F2Z478 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Gm11238F2Z478 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11238F2Z478 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11238F2Z478 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Gm43137-201ENSMUST00000198052 594 ntBASIC21.96■■□□□ 1.11
Gm11238F2Z478 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Gm11238F2Z478 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm11238F2Z478 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm11238F2Z478 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.95■■□□□ 1.1
Gm11238F2Z478 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm11238F2Z478 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Gm11238F2Z478 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Gm11238F2Z478 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm11238F2Z478 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11238F2Z478 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11238F2Z478 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Gm11238F2Z478 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Gm11238F2Z478 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms