Protein–RNA interactions for Protein: E9Q5I3

Muc5b, Mucin 5, subtype B, tracheobronchial, mousemouse

Predictions only

Length 4,800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Muc5bE9Q5I3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Muc5bE9Q5I3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 Gm29241-201ENSMUST00000189260 1096 ntBASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Muc5bE9Q5I3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Fezf2-202ENSMUST00000224023 1917 ntBASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Gm12251-201ENSMUST00000117893 792 ntBASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Gm12527-201ENSMUST00000117967 564 ntBASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Muc5bE9Q5I3 Gm12441-201ENSMUST00000121806 588 ntBASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Gm10620-201ENSMUST00000098379 1332 ntBASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Gm25925-201ENSMUST00000158314 306 ntBASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Muc5bE9Q5I3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Gm8520-201ENSMUST00000186517 868 ntBASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Muc5bE9Q5I3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Amer2-203ENSMUST00000225247 2662 ntBASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Gm13181-201ENSMUST00000120117 1069 ntBASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC9.43□□□□□ -0.9
Muc5bE9Q5I3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Gm6206-201ENSMUST00000133472 2199 ntBASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Muc5bE9Q5I3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Muc5bE9Q5I3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Muc5bE9Q5I3 Gm13168-201ENSMUST00000121771 632 ntBASIC9.4□□□□□ -0.9
Muc5bE9Q5I3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Muc5bE9Q5I3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Muc5bE9Q5I3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Muc5bE9Q5I3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms