Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pcdh17E9PXF0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh17E9PXF0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh17E9PXF0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh17E9PXF0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh17E9PXF0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh17E9PXF0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh17E9PXF0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh17E9PXF0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh17E9PXF0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh17E9PXF0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh17E9PXF0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh17E9PXF0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.34■□□□□ 0.69
Pcdh17E9PXF0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Pcdh17E9PXF0 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.34■□□□□ 0.69
Pcdh17E9PXF0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh17E9PXF0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh17E9PXF0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Pcdh17E9PXF0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh17E9PXF0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdh17E9PXF0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh17E9PXF0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdh17E9PXF0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdh17E9PXF0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms