Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp27D3YV89 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.5■□□□□ 0.39
Mmp27D3YV89 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp27D3YV89 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp27D3YV89 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp27D3YV89 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.49■□□□□ 0.39
Mmp27D3YV89 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.49■□□□□ 0.39
Mmp27D3YV89 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Mmp27D3YV89 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp27D3YV89 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.49■□□□□ 0.39
Mmp27D3YV89 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.49■□□□□ 0.39
Mmp27D3YV89 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mmp27D3YV89 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp27D3YV89 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mmp27D3YV89 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.47■□□□□ 0.39
Mmp27D3YV89 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.47■□□□□ 0.39
Mmp27D3YV89 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.47■□□□□ 0.39
Mmp27D3YV89 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Mmp27D3YV89 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp27D3YV89 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp27D3YV89 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp27D3YV89 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mmp27D3YV89 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Mmp27D3YV89 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp27D3YV89 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.45■□□□□ 0.38
Mmp27D3YV89 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Mmp27D3YV89 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp27D3YV89 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Mmp27D3YV89 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp27D3YV89 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp27D3YV89 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp27D3YV89 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mmp27D3YV89 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp27D3YV89 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Mmp27D3YV89 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.43■□□□□ 0.38
Mmp27D3YV89 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp27D3YV89 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp27D3YV89 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp27D3YV89 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mmp27D3YV89 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp27D3YV89 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mmp27D3YV89 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Gm10420-201ENSMUST00000121713 882 ntBASIC17.41■□□□□ 0.38
Mmp27D3YV89 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.41■□□□□ 0.38
Mmp27D3YV89 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp27D3YV89 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms