Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.48■□□□□ 0.39
Chd6A3KFM7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.48■□□□□ 0.39
Chd6A3KFM7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Mir6982-201ENSMUST00000184354 68 ntBASIC17.48■□□□□ 0.39
Chd6A3KFM7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chd6A3KFM7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chd6A3KFM7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chd6A3KFM7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Chd6A3KFM7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Chd6A3KFM7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Chd6A3KFM7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.47■□□□□ 0.39
Chd6A3KFM7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
Chd6A3KFM7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.46■□□□□ 0.39
Chd6A3KFM7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd6A3KFM7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Chd6A3KFM7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chd6A3KFM7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd6A3KFM7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd6A3KFM7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chd6A3KFM7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chd6A3KFM7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd6A3KFM7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd6A3KFM7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chd6A3KFM7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.45■□□□□ 0.38
Chd6A3KFM7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chd6A3KFM7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.44■□□□□ 0.38
Chd6A3KFM7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.44■□□□□ 0.38
Chd6A3KFM7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chd6A3KFM7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd6A3KFM7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.43■□□□□ 0.38
Chd6A3KFM7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chd6A3KFM7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chd6A3KFM7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd6A3KFM7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.41■□□□□ 0.38
Chd6A3KFM7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd6A3KFM7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Chd6A3KFM7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd6A3KFM7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd6A3KFM7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chd6A3KFM7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chd6A3KFM7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd6A3KFM7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chd6A3KFM7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chd6A3KFM7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.39■□□□□ 0.37
Chd6A3KFM7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd6A3KFM7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.38■□□□□ 0.37
Chd6A3KFM7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd6A3KFM7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd6A3KFM7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.37■□□□□ 0.37
Chd6A3KFM7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd6A3KFM7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd6A3KFM7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd6A3KFM7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Chd6A3KFM7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.37■□□□□ 0.37
Chd6A3KFM7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd6A3KFM7 Gm12441-201ENSMUST00000121806 588 ntBASIC17.36■□□□□ 0.37
Chd6A3KFM7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
Chd6A3KFM7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd6A3KFM7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd6A3KFM7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd6A3KFM7 Gm40848-201ENSMUST00000221998 324 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms