Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav13n-1A0A0G2JEU8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav13n-1A0A0G2JEU8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-1A0A0G2JEU8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-1A0A0G2JEU8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.05■□□□□ 0
Trav13n-1A0A0G2JEU8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-1A0A0G2JEU8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav13n-1A0A0G2JEU8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav13n-1A0A0G2JEU8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.04■□□□□ -0
Trav13n-1A0A0G2JEU8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav13n-1A0A0G2JEU8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Gm7417-201ENSMUST00000192950 473 ntBASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.02■□□□□ -0
Trav13n-1A0A0G2JEU8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav13n-1A0A0G2JEU8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms