Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Gm7432-201ENSMUST00000210343 879 ntBASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Terc-201ENSMUST00000082862 423 ntBASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.69■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav3n-3A0A0G2JEM0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Trav3n-3A0A0G2JEM0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.64■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Gm11599-201ENSMUST00000118720 878 ntBASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Gm45364-201ENSMUST00000210883 159 ntBASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav3n-3A0A0G2JEM0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms