Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-4A0A0B4J1K2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Dmtn-209ENSMUST00000228295 2572 ntBASIC15.69■□□□□ 0.1
Trav9-4A0A0B4J1K2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gm15546-201ENSMUST00000122095 826 ntBASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav9-4A0A0B4J1K2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9-4A0A0B4J1K2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9-4A0A0B4J1K2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav9-4A0A0B4J1K2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9-4A0A0B4J1K2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav9-4A0A0B4J1K2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav9-4A0A0B4J1K2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav9-4A0A0B4J1K2 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9-4A0A0B4J1K2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9-4A0A0B4J1K2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav9-4A0A0B4J1K2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav9-4A0A0B4J1K2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav9-4A0A0B4J1K2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav9-4A0A0B4J1K2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trav9-4A0A0B4J1K2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms