Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gm40881-201ENSMUST00000223397 166 ntBASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.58■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbv12-1A0A0B4J1H0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.57■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.52■□□□□ 0.56
Trbv12-1A0A0B4J1H0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv12-1A0A0B4J1H0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.5■□□□□ 0.55
Trbv12-1A0A0B4J1H0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms