Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv15A0A0A6YYE3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbv15A0A0A6YYE3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbv15A0A0A6YYE3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbv15A0A0A6YYE3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Gm7432-201ENSMUST00000210343 879 ntBASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbv15A0A0A6YYE3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Gm11599-201ENSMUST00000118720 878 ntBASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv15A0A0A6YYE3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv15A0A0A6YYE3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.35■□□□□ 0.37
Trbv15A0A0A6YYE3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv15A0A0A6YYE3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv15A0A0A6YYE3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv15A0A0A6YYE3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv15A0A0A6YYE3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv15A0A0A6YYE3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv15A0A0A6YYE3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv15A0A0A6YYE3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv15A0A0A6YYE3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv15A0A0A6YYE3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv15A0A0A6YYE3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv15A0A0A6YYE3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trbv15A0A0A6YYE3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv15A0A0A6YYE3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trbv15A0A0A6YYE3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms