Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv3A0A0A6YYE2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.13■□□□□ 0.17
Trbv3A0A0A6YYE2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv3A0A0A6YYE2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv3A0A0A6YYE2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv3A0A0A6YYE2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trbv3A0A0A6YYE2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv3A0A0A6YYE2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.11■□□□□ 0.17
Trbv3A0A0A6YYE2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv3A0A0A6YYE2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv3A0A0A6YYE2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv3A0A0A6YYE2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.08■□□□□ 0.17
Trbv3A0A0A6YYE2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Trbv3A0A0A6YYE2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trbv3A0A0A6YYE2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv3A0A0A6YYE2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv3A0A0A6YYE2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv3A0A0A6YYE2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv3A0A0A6YYE2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv3A0A0A6YYE2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Gm45364-201ENSMUST00000210883 159 ntBASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv3A0A0A6YYE2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv3A0A0A6YYE2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms