Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbc1A0A0A6YWV4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbc1A0A0A6YWV4 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.16■□□□□ 0.66
Trbc1A0A0A6YWV4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbc1A0A0A6YWV4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbc1A0A0A6YWV4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Trbc1A0A0A6YWV4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Trbc1A0A0A6YWV4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trbc1A0A0A6YWV4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trbc1A0A0A6YWV4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trbc1A0A0A6YWV4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbc1A0A0A6YWV4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbc1A0A0A6YWV4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbc1A0A0A6YWV4 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbc1A0A0A6YWV4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbc1A0A0A6YWV4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trbc1A0A0A6YWV4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Rps24-207ENSMUST00000224568 714 ntBASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trbc1A0A0A6YWV4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trbc1A0A0A6YWV4 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms