Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13-4-dv7A0A075B6C2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Notumos-201ENSMUST00000151998 2659 ntBASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Gm9806-201ENSMUST00000051080 552 ntBASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13-4-dv7A0A075B6C2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav13-4-dv7A0A075B6C2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms