Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav12-3A0A075B648 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav12-3A0A075B648 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Trav12-3A0A075B648 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Trav12-3A0A075B648 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-3A0A075B648 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav12-3A0A075B648 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-3A0A075B648 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-3A0A075B648 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav12-3A0A075B648 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-3A0A075B648 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12-3A0A075B648 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12-3A0A075B648 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.19■□□□□ 0.02
Trav12-3A0A075B648 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms