Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8-1A0A075B641 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8-1A0A075B641 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.88□□□□□ -0.03
Trav8-1A0A075B641 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Gm22567-201ENSMUST00000175542 342 ntBASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8-1A0A075B641 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Gm37136-201ENSMUST00000194368 194 ntBASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Nkain2-201ENSMUST00000092602 558 ntBASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8-1A0A075B641 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8-1A0A075B641 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8-1A0A075B641 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav8-1A0A075B641 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8-1A0A075B641 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav8-1A0A075B641 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8-1A0A075B641 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav8-1A0A075B641 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav8-1A0A075B641 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav8-1A0A075B641 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav8-1A0A075B641 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Trav8-1A0A075B641 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms