Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Gm11687-201ENSMUST00000118911 886 ntBASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Notumos-201ENSMUST00000151998 2659 ntBASIC17.71■□□□□ 0.43
Trav15d-1-dv6d-1A0A075B624 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.68■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav15d-1-dv6d-1A0A075B624 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.64■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav15d-1-dv6d-1A0A075B624 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms