Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-1A0A075B606 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-1A0A075B606 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-1A0A075B606 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-1A0A075B606 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-1A0A075B606 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Gm40881-201ENSMUST00000223397 166 ntBASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-1A0A075B606 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trav13d-1A0A075B606 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-1A0A075B606 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Gm10399-202ENSMUST00000202768 748 ntBASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-1A0A075B606 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-1A0A075B606 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trav13d-1A0A075B606 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms