Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv1-53A0A075B5W3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ighv1-53A0A075B5W3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-53A0A075B5W3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-53A0A075B5W3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.77■□□□□ 0.12
Ighv1-53A0A075B5W3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv1-53A0A075B5W3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-53A0A075B5W3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-53A0A075B5W3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-53A0A075B5W3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-53A0A075B5W3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ighv1-53A0A075B5W3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-53A0A075B5W3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-53A0A075B5W3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-53A0A075B5W3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-53A0A075B5W3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-53A0A075B5W3 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv1-53A0A075B5W3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv1-53A0A075B5W3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv1-53A0A075B5W3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv1-53A0A075B5W3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms