Protein–RNA interactions for Protein: A0A075B5T0

Ighv3-8, Immunoglobulin heavy variable V3-8 (Fragment), mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-8A0A075B5T0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv3-8A0A075B5T0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv3-8A0A075B5T0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv3-8A0A075B5T0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Ighv3-8A0A075B5T0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv3-8A0A075B5T0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv3-8A0A075B5T0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ighv3-8A0A075B5T0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.67■□□□□ 0.1
Ighv3-8A0A075B5T0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ighv3-8A0A075B5T0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ighv3-8A0A075B5T0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Ighv3-8A0A075B5T0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Ighv3-8A0A075B5T0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms