Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb2S4R1M3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb2S4R1M3 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb2S4R1M3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
H2afb2S4R1M3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Gm12314-201ENSMUST00000118104 538 ntBASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb2S4R1M3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb2S4R1M3 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms