Protein–RNA interactions for Protein: Q9Z260

Cldn8, Claudin-8, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn8Q9Z260 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Gm12502-201ENSMUST00000120197 444 ntBASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Gm23119-201ENSMUST00000158610 140 ntBASIC11.82□□□□□ -0.52
Cldn8Q9Z260 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.82□□□□□ -0.52
Cldn8Q9Z260 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm11478-201ENSMUST00000117851 599 ntBASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm43818-201ENSMUST00000200605 466 ntBASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm18584-201ENSMUST00000203098 964 ntBASIC11.81□□□□□ -0.52
Cldn8Q9Z260 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm45930-201ENSMUST00000221330 292 ntBASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm22058-201ENSMUST00000083393 310 ntBASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cldn8Q9Z260 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Gm11591-201ENSMUST00000120063 702 ntBASIC11.8□□□□□ -0.52
Cldn8Q9Z260 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.8□□□□□ -0.52
Cldn8Q9Z260 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms