Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm13829-201ENSMUST00000119600 138 ntBASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm18187-201ENSMUST00000196476 984 ntBASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cldn9Q9Z0S7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Matn2-203ENSMUST00000226766 3252 ntBASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cldn9Q9Z0S7 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Gm24548-201ENSMUST00000158650 108 ntBASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Gm18304-201ENSMUST00000189162 546 ntBASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cldn9Q9Z0S7 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms