Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpxQ9JHS4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm15824-201ENSMUST00000119516 955 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm6244-201ENSMUST00000178732 841 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm8602-201ENSMUST00000184045 607 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Map1b-203ENSMUST00000223725 2669 ntBASIC11.43□□□□□ -0.58
ClpxQ9JHS4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm27486-201ENSMUST00000184923 80 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm43433-201ENSMUST00000196573 481 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm26035-201ENSMUST00000083065 308 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ClpxQ9JHS4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms