Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube3bQ9ES34 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Gm8913-201ENSMUST00000209491 641 ntBASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Gm9519-201ENSMUST00000206108 1337 ntBASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube3bQ9ES34 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Gm18212-201ENSMUST00000211678 889 ntBASIC14.8□□□□□ -0.04
Ube3bQ9ES34 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube3bQ9ES34 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube3bQ9ES34 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms