Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ube4bQ9ES00 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Ube4bQ9ES00 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Gm15920-201ENSMUST00000118998 402 ntBASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Gm42599-201ENSMUST00000201308 469 ntBASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Ube4bQ9ES00 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ube4bQ9ES00 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ube4bQ9ES00 Btrc-209ENSMUST00000224478 2194 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms