Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Gm44086-201ENSMUST00000203251 2349 ntBASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ripk4Q9ERK0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm26361-201ENSMUST00000158868 186 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm45011-201ENSMUST00000207620 2297 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ripk4Q9ERK0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Gm11439-201ENSMUST00000118598 409 ntBASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ripk4Q9ERK0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms