Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm44980-201ENSMUST00000205826 314 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nkx2-4Q9EQM3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm11949-201ENSMUST00000117640 372 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm16071-201ENSMUST00000119589 793 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm22442-201ENSMUST00000157256 144 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm28388-201ENSMUST00000186262 437 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm17826-201ENSMUST00000189720 798 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm43520-201ENSMUST00000197996 164 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Gm42657-201ENSMUST00000201746 211 ntBASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nkx2-4Q9EQM3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms