Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Gm2420-201ENSMUST00000119864 2149 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 AC122197.2-201ENSMUST00000219196 1635 ntBASIC16.37■□□□□ 0.21
U2af1Q9D883 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
U2af1Q9D883 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
U2af1Q9D883 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm5070-201ENSMUST00000177599 862 ntBASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.36■□□□□ 0.21
U2af1Q9D883 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.36■□□□□ 0.21
U2af1Q9D883 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
U2af1Q9D883 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
U2af1Q9D883 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Gm4760-201ENSMUST00000119663 1030 ntBASIC16.35■□□□□ 0.21
U2af1Q9D883 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.35■□□□□ 0.21
U2af1Q9D883 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC16.35■□□□□ 0.21
U2af1Q9D883 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC16.35■□□□□ 0.21
U2af1Q9D883 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
U2af1Q9D883 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC16.34■□□□□ 0.21
U2af1Q9D883 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Gm25700-201ENSMUST00000177693 110 ntBASIC16.34■□□□□ 0.21
U2af1Q9D883 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC16.34■□□□□ 0.21
U2af1Q9D883 Gm45691-201ENSMUST00000206905 1120 ntBASIC16.34■□□□□ 0.21
U2af1Q9D883 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
U2af1Q9D883 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms