Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps33aQ9D2N9 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Mir339-201ENSMUST00000083659 96 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.18□□□□□ -0.3
Vps33aQ9D2N9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vps33aQ9D2N9 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms