Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim42Q9D2H5 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim42Q9D2H5 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Gm20614-201ENSMUST00000177106 632 ntBASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Gm9063-201ENSMUST00000223299 582 ntBASIC12.52□□□□□ -0.41
Trim42Q9D2H5 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trim42Q9D2H5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm15371-201ENSMUST00000117057 784 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm13616-201ENSMUST00000120600 222 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm12291-201ENSMUST00000121627 311 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm22175-201ENSMUST00000175007 78 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm6458-201ENSMUST00000211573 635 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim42Q9D2H5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms