Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm6218-201ENSMUST00000219812 628 ntBASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Chaf1bQ9D0N7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm19220-201ENSMUST00000222682 803 ntBASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.69□□□□□ -0.54
Chaf1bQ9D0N7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Gm5687-201ENSMUST00000118252 640 ntBASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Gm15429-201ENSMUST00000151268 798 ntBASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.68□□□□□ -0.54
Chaf1bQ9D0N7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chaf1bQ9D0N7 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms