Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Itm2b-204ENSMUST00000228637 783 ntBASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Ddx47Q9CWX9 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Cog3-203ENSMUST00000227473 4197 ntBASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ddx47Q9CWX9 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm15703-201ENSMUST00000120250 880 ntBASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx47Q9CWX9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.78□□□□□ -0.36
Ddx47Q9CWX9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx47Q9CWX9 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx47Q9CWX9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx47Q9CWX9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.78□□□□□ -0.36
Ddx47Q9CWX9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx47Q9CWX9 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms