Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rpa3Q9CQ71 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm14760-201ENSMUST00000121831 999 ntBASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm9630-201ENSMUST00000178304 885 ntBASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Mospd4-201ENSMUST00000180618 576 ntBASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm18054-201ENSMUST00000207539 555 ntBASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gm6007-201ENSMUST00000208170 823 ntBASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rpa3Q9CQ71 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm13736-201ENSMUST00000119272 253 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm13315-201ENSMUST00000120376 991 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm11793-201ENSMUST00000120433 981 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm11597-201ENSMUST00000121423 964 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm6013-201ENSMUST00000212264 699 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm9823-201ENSMUST00000051212 327 ntBASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rpa3Q9CQ71 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms