Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim11Q99PQ2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm9022-201ENSMUST00000182482 992 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm6266-201ENSMUST00000203844 806 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm22058-201ENSMUST00000083393 310 ntBASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim11Q99PQ2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm11597-201ENSMUST00000121423 964 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm8738-201ENSMUST00000172606 329 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm27243-201ENSMUST00000183964 521 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm45925-201ENSMUST00000218882 744 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Cog3-203ENSMUST00000227473 4197 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim11Q99PQ2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms