Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Gm18062-201ENSMUST00000208020 547 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Gm18055-201ENSMUST00000208254 547 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.22□□□□□ -0.45
Trim16Q99PP9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim16Q99PP9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.21□□□□□ -0.45
Trim16Q99PP9 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.21□□□□□ -0.45
Trim16Q99PP9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.21□□□□□ -0.45
Trim16Q99PP9 Mir7085-201ENSMUST00000184353 66 ntBASIC12.21□□□□□ -0.45
Trim16Q99PP9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.21□□□□□ -0.45
Trim16Q99PP9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim16Q99PP9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim16Q99PP9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.2□□□□□ -0.46
Trim16Q99PP9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim16Q99PP9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim16Q99PP9 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.2□□□□□ -0.46
Trim16Q99PP9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms