Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cdh23Q99PF4 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Cdh23Q99PF4 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.33□□□□□ -0.43
Cdh23Q99PF4 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Cdh23Q99PF4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cdh23Q99PF4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm27956-201ENSMUST00000175604 260 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm5451-201ENSMUST00000080545 579 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm24231-201ENSMUST00000104315 133 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm12791-201ENSMUST00000120788 655 ntBASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cdh23Q99PF4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm34379-201ENSMUST00000195036 290 ntBASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gm6564-201ENSMUST00000075377 619 ntBASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh23Q99PF4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm29304-201ENSMUST00000186555 695 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm29223-201ENSMUST00000188867 695 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm37921-201ENSMUST00000194333 695 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm37782-201ENSMUST00000194879 678 ntBASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh23Q99PF4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms