Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tlr3Q99MB1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Mir433-201ENSMUST00000093564 124 ntBASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tlr3Q99MB1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm15370-201ENSMUST00000117158 253 ntBASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm2991-201ENSMUST00000173338 480 ntBASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm24136-201ENSMUST00000083374 165 ntBASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms