Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.07□□□□□ -0.48
Cstf3Q99LI7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cstf3Q99LI7 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Gm10268-201ENSMUST00000085340 555 ntBASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cstf3Q99LI7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gm24231-201ENSMUST00000104315 133 ntBASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.05□□□□□ -0.48
Cstf3Q99LI7 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cstf3Q99LI7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms