Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clip1Q922J3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm14724-201ENSMUST00000118400 537 ntBASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm8199-201ENSMUST00000121323 823 ntBASIC19.4■□□□□ 0.7
Clip1Q922J3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm23085-201ENSMUST00000157849 293 ntBASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clip1Q922J3 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm6781-201ENSMUST00000038304 1242 ntBASIC19.4■□□□□ 0.7
Clip1Q922J3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC19.4■□□□□ 0.7
Clip1Q922J3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm9072-201ENSMUST00000218390 1514 ntBASIC19.4■□□□□ 0.7
Clip1Q922J3 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Ssr1-203ENSMUST00000225246 1825 ntBASIC19.4■□□□□ 0.7
Clip1Q922J3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip1Q922J3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip1Q922J3 Gm37644-201ENSMUST00000192190 2270 ntBASIC19.39■□□□□ 0.7
Clip1Q922J3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip1Q922J3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip1Q922J3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip1Q922J3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip1Q922J3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
Clip1Q922J3 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Clip1Q922J3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC19.39■□□□□ 0.69
Clip1Q922J3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Clip1Q922J3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC19.39■□□□□ 0.69
Clip1Q922J3 Gm44551-201ENSMUST00000208804 171 ntBASIC19.39■□□□□ 0.69
Clip1Q922J3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 AC141438.2-201ENSMUST00000215068 271 ntBASIC19.39■□□□□ 0.69
Clip1Q922J3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC19.39■□□□□ 0.69
Clip1Q922J3 AC135114.1-201ENSMUST00000228682 270 ntBASIC19.39■□□□□ 0.69
Clip1Q922J3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Clip1Q922J3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Gm10179-201ENSMUST00000086233 688 ntBASIC19.39■□□□□ 0.69
Clip1Q922J3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip1Q922J3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm44999-201ENSMUST00000207456 1493 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm4735-201ENSMUST00000138679 1302 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm5855-201ENSMUST00000200240 1305 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm11511-201ENSMUST00000118146 540 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm8566-201ENSMUST00000120174 465 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm37246-201ENSMUST00000192665 835 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm44545-201ENSMUST00000208262 746 ntBASIC19.38■□□□□ 0.69
Clip1Q922J3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC19.38■□□□□ 0.69
Clip1Q922J3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clip1Q922J3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC19.37■□□□□ 0.69
Clip1Q922J3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip1Q922J3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip1Q922J3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Clip1Q922J3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clip1Q922J3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip1Q922J3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip1Q922J3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC19.37■□□□□ 0.69
Clip1Q922J3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC19.37■□□□□ 0.69
Clip1Q922J3 Gm15131-201ENSMUST00000119124 595 ntBASIC19.37■□□□□ 0.69
Clip1Q922J3 Gm11667-201ENSMUST00000119828 486 ntBASIC19.37■□□□□ 0.69
Clip1Q922J3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms