Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga3Q91XY5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm23363-201ENSMUST00000175024 79 ntBASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm26927-201ENSMUST00000182385 965 ntBASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Mir339-201ENSMUST00000083659 96 ntBASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga3Q91XY5 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.15□□□□□ -0.63
Pcdhga3Q91XY5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Pcdhga3Q91XY5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm16177-201ENSMUST00000120728 718 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm10268-201ENSMUST00000085340 555 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Pcdhga3Q91XY5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms