Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.35□□□□□ -0.27
TraipQ8VIG6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TraipQ8VIG6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Gm9083-201ENSMUST00000120423 819 ntBASIC13.34□□□□□ -0.27
TraipQ8VIG6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Gm44262-201ENSMUST00000204969 372 ntBASIC13.34□□□□□ -0.27
TraipQ8VIG6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TraipQ8VIG6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TraipQ8VIG6 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
TraipQ8VIG6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TraipQ8VIG6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TraipQ8VIG6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.33□□□□□ -0.27
TraipQ8VIG6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm14277-201ENSMUST00000121195 360 ntBASIC13.33□□□□□ -0.28
TraipQ8VIG6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.33□□□□□ -0.28
TraipQ8VIG6 AY036118-201ENSMUST00000200021 923 ntBASIC13.33□□□□□ -0.28
TraipQ8VIG6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.33□□□□□ -0.28
TraipQ8VIG6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm8385-201ENSMUST00000058999 643 ntBASIC13.33□□□□□ -0.28
TraipQ8VIG6 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TraipQ8VIG6 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm38014-201ENSMUST00000193349 2612 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm14208-201ENSMUST00000119645 678 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm5616-201ENSMUST00000165252 384 ntBASIC13.32□□□□□ -0.28
TraipQ8VIG6 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
TraipQ8VIG6 Gm8741-201ENSMUST00000174736 384 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms