Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lsm1Q8VC85 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.96□□□□□ -0.49
Lsm1Q8VC85 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Map1b-203ENSMUST00000223725 2669 ntBASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gm13492-201ENSMUST00000119772 665 ntBASIC11.96□□□□□ -0.49
Lsm1Q8VC85 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm1Q8VC85 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm1Q8VC85 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm1Q8VC85 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms